Represents the center of a network. It handles the enlarging when it is pressed. More...

Inheritance diagram for CellexalVR.AnalysisObjects.NetworkCenter:

Public Types
enum	Layout { TWO_D, THREE_D }

Public Member Functions
void	ToggleNodeColliders (bool b, string exception)
	Used to disable colliders of nodes to avoid the controller being inside many nodes at the same time. More...

void	AddNode (NetworkNode newNode)
	Adds a node to this network. More...

void	CalculateLayout (Layout layout)
	Calcualte a new layout. More...

void	SwitchLayout (Layout layout)
	Switches the layout of the network. More...

void	EnlargeNetwork ()
	Called when the controller is inside the network and the trigger is pressed. Enlarges the network and seperates it from the skeleton and makes it movable by the user. More...

Coroutine	BringBackOriginal ()
	If this network is enlarged, bring it back to the convex hull, if it is a replacement, destroy it and bring back the original More...

void	SetArcsVisible (bool toggleToState)
	Shows or hides all normal arcs connected to this network. More...

void	SetArcsVisible (bool toggleToState, NetworkCenter otherCenter)
	Shows or hides all arcs that go from this NetworkCenter to another NetworkCenter. More...

void	SetCombinedArcsVisible (bool toggleToState)
	Shows or hides all combined arcs connected to this network. More...

int	CreateCombinedArcs ()
	Creates combined arcs. A combined arc is a colored line that represents the number of normal arcs that go from this network to another. More...

void	SaveNetworkAsTextFile ()
	Saves this network as a text file More...

void	SaveNetworkAsImage ()
	Saves this network as an .png image More...

void	HighLightGene (string geneName, bool highlight=true)
	Highlights a gene in this network with a red circle. More...

void	HighlightNode (string name, bool highlight)
	Highlights or resets highlighting of a node in this NetworkCenter. More...

Public Attributes
GameObject	replacementPrefab

GameObject	edgePrefab

GameObject	arcDescriptionPrefab

GameObject	simpleArcDescriptionPrefab

List< Color >	combinedArcsColors

BoxCollider	ringCollider

ReferenceManager	referenceManager

SaveNetworkAsImageButton	saveImageButton

GameObject	movingOutlineCircle

Cell[]	cellsInGroup

bool	isReplacement = false

bool	controllerInsideSomeNode

NetworkCenter	replacing

Properties
NetworkHandler	Handler `[get, set]`

int	Group `[get, set]`

float	MaxNegPcor `[get, set]`

float	MinNegPcor `[get, set]`

float	MaxPosPcor `[get, set]`

float	MinPosPcor `[get, set]`

int	LayoutSeed `[get, set]`

bool	Enlarged `[get]`

Detailed Description

Represents the center of a network. It handles the enlarging when it is pressed.

Member Function Documentation

◆ AddNode()

void CellexalVR.AnalysisObjects.NetworkCenter.AddNode ( NetworkNode newNode )

Adds a node to this network.

Parameters

newNode The node to add.

◆ BringBackOriginal()

Coroutine CellexalVR.AnalysisObjects.NetworkCenter.BringBackOriginal ( )

If this network is enlarged, bring it back to the convex hull, if it is a replacement, destroy it and bring back the original

◆ CalculateLayout()

void CellexalVR.AnalysisObjects.NetworkCenter.CalculateLayout ( Layout layout )

Calcualte a new layout.

Parameters

layout The desired type of layout.

◆ CreateCombinedArcs()

int CellexalVR.AnalysisObjects.NetworkCenter.CreateCombinedArcs ( )

Creates combined arcs. A combined arc is a colored line that represents the number of normal arcs that go from this network to another.

Returns: The maximum number of arcs that were combined to one.

◆ EnlargeNetwork()

void CellexalVR.AnalysisObjects.NetworkCenter.EnlargeNetwork ( )

Called when the controller is inside the network and the trigger is pressed. Enlarges the network and seperates it from the skeleton and makes it movable by the user.

◆ HighLightGene()

void CellexalVR.AnalysisObjects.NetworkCenter.HighLightGene	(	string	geneName,
		bool	highlight = `true`
	)

Highlights a gene in this network with a red circle.

Parameters

geneName The gene to highlight.

◆ HighlightNode()

void CellexalVR.AnalysisObjects.NetworkCenter.HighlightNode	(	string	name,
		bool	highlight
	)

Highlights or resets highlighting of a node in this NetworkCenter.

Parameters

name	The name of the node to highlight.
highlight	True if the node should be highlighted, false to reset highlighting.

◆ SaveNetworkAsImage()

void CellexalVR.AnalysisObjects.NetworkCenter.SaveNetworkAsImage ( )

Saves this network as an .png image

◆ SaveNetworkAsTextFile()

void CellexalVR.AnalysisObjects.NetworkCenter.SaveNetworkAsTextFile ( )

Saves this network as a text file

◆ SetArcsVisible() [1/2]

void CellexalVR.AnalysisObjects.NetworkCenter.SetArcsVisible ( bool toggleToState )

Shows or hides all normal arcs connected to this network.

Parameters

toggleToState The state to toggle to, true for visible false for invisible.

◆ SetArcsVisible() [2/2]

void CellexalVR.AnalysisObjects.NetworkCenter.SetArcsVisible	(	bool	toggleToState,
		NetworkCenter	otherCenter
	)

Shows or hides all arcs that go from this NetworkCenter to another NetworkCenter.

Parameters

toggleToState	True if arcs should be visible, false if they should be invisible.
otherCenter	The other NetworkCenter that arcs connect to.

◆ SetCombinedArcsVisible()

void CellexalVR.AnalysisObjects.NetworkCenter.SetCombinedArcsVisible ( bool toggleToState )

Shows or hides all combined arcs connected to this network.

Parameters

toggleToState The state to toggle to, true for visible false for invisible.

◆ SwitchLayout()

void CellexalVR.AnalysisObjects.NetworkCenter.SwitchLayout ( Layout layout )

Switches the layout of the network.

Parameters

layout The layout to switch to.

◆ ToggleNodeColliders()

void CellexalVR.AnalysisObjects.NetworkCenter.ToggleNodeColliders	(	bool	b,
		string	exception
	)

Used to disable colliders of nodes to avoid the controller being inside many nodes at the same time.

Parameters

b	Toggle on/off
exception	The first node that the controller entered should be the only one to stay active.

The documentation for this class was generated from the following file:

cellexalvr_cloudxr/Assets/Scripts/AnalysisObjects/NetworkCenter.cs

Public Types

Public Member Functions

Public Attributes

Properties

Detailed Description

Member Function Documentation

◆ AddNode()

◆ BringBackOriginal()

◆ CalculateLayout()

◆ CreateCombinedArcs()

◆ EnlargeNetwork()

◆ HighLightGene()

◆ HighlightNode()

◆ SaveNetworkAsImage()

◆ SaveNetworkAsTextFile()

◆ SetArcsVisible() [1/2]

◆ SetArcsVisible() [2/2]

◆ SetCombinedArcsVisible()

◆ SwitchLayout()

◆ ToggleNodeColliders()