CellexalVR.AnalysisObjects.GraphGenerator Class Reference

A graph that contain one or more CombinedCluster that in turn contain one or more CombinedGraphPoint. More...

Inheritance diagram for CellexalVR.AnalysisObjects.GraphGenerator:

Classes
struct	CombineMeshesJob
	Job that combines the meshes of one cluster. More...

Public Types
enum	GraphType { MDS, FACS, ATTRIBUTE, BETWEEN }

Public Member Functions
Graph	CreateGraph (GraphType type)
	Creates a new graph of the given type. More...
void	CreateShaderColors ()
	Creates the texture that the CombinedGraph shader uses to fetch colors for the graphpoints. More...
Graph.GraphPoint	AddGraphPoint (Cell cell, float x, float y, float z)
	Adds a graphpoint to this graph. The coordinates should be scaled later with ScaleAllCoordinates. More...
void	AddAxes (Graph graph, string[] axisNames)
	Adds arrows representing the axes of the graph. More...
void	SliceClustering (Dictionary< string, Graph.GraphPoint > points=null)
	Divides the graph into clusters. The graph starts out as one large cluster and is recursively divided into smaller and smaller clusters until all clusters can be rendered in Unity using a single mesh. More...
void	CreateSubGraphs ()
void	CreateSubGraphs (List< string > attributes)
	Creates a subgraph based on some attrbiutes. More...
void	CreatePointsBetweenGraphs (Cell[] cells, Vector3[] positions)
void	CreateColliders ()
	Adds many boxcolliders to this graph. The idea is that when grabbing graphs we do not want to collide with all the small colliders on the graphpoints, so we put many boxcolliders that cover the graph instead. More...

Public Attributes
ReferenceManager	referenceManager
GameObject	graphpointsPrefab
GameObject	graphPrefab
GameObject	AxesPrefabColoured
GameObject	AxesPrefabUncoloured
Material	graphPointMaterialPrefab
GameObject	skeletonPrefab
Mesh	graphpointStandardQStandardSzMesh
Mesh	graphpointStandardQSmallSzMesh
Mesh	graphpointStandardQLargeSzMesh
Mesh	graphpointLowQStandardSzMesh
Mesh	graphpointLowQSmallSzMesh
Mesh	graphpointLowQLargeSzMesh
Mesh	meshToUse
bool	isCreating
bool	addingToExisting
Texture2D	graphPointColors
int	graphCount

Properties
string	DirectoryName [get, set]

Detailed Description

A graph that contain one or more CombinedCluster that in turn contain one or more CombinedGraphPoint.

Member Function Documentation

AddAxes()

void CellexalVR.AnalysisObjects.GraphGenerator.AddAxes	(	Graph	graph,
		string[]	axisNames
	)

Adds arrows representing the axes of the graph.

Parameters

graph	The graph to add axes to.
axisNames	The labels on the axes.

AddGraphPoint()

Graph.GraphPoint CellexalVR.AnalysisObjects.GraphGenerator.AddGraphPoint	(	Cell	cell,
		float	x,
		float	y,
		float	z
	)

Adds a graphpoint to this graph. The coordinates should be scaled later with ScaleAllCoordinates.

Parameters

label	The graphpoint's (cell's) name.
x	The x-coordinate.
y	The y-coordinate.
z	The z-coordinate.

CreateColliders()

void CellexalVR.AnalysisObjects.GraphGenerator.CreateColliders

(

)

Adds many boxcolliders to this graph. The idea is that when grabbing graphs we do not want to collide with all the small colliders on the graphpoints, so we put many boxcolliders that cover the graph instead.

CreateGraph()

Graph CellexalVR.AnalysisObjects.GraphGenerator.CreateGraph

(

GraphType

type

)

Creates a new graph of the given type.

Parameters

type	The type of graph to create.

Returns

The new graph.

CreateShaderColors()

void CellexalVR.AnalysisObjects.GraphGenerator.CreateShaderColors

(

)

Creates the texture that the CombinedGraph shader uses to fetch colors for the graphpoints.

CreateSubGraphs()

void CellexalVR.AnalysisObjects.GraphGenerator.CreateSubGraphs

(

List< string >

attributes

)

Creates a subgraph based on some attrbiutes.

Parameters

attributes

The attributes to include in the subgraph.

SliceClustering()

void CellexalVR.AnalysisObjects.GraphGenerator.SliceClustering

(

Dictionary< string, Graph.GraphPoint >

points = null

)

Divides the graph into clusters. The graph starts out as one large cluster and is recursively divided into smaller and smaller clusters until all clusters can be rendered in Unity using a single mesh.

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The documentation for this class was generated from the following file:

• Assets/Scripts/AnalysisObjects/GraphGenerator.cs